Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDVTSQARGVGLEMYPGTAQPAAPNTTSPELNLSHPLLGTALANGTGELSEHQQYVIGL--------FLSCLYTIFLFPIGFVGNILILVVNISFREKMTIPDLYFINLAVADL--ILVADSLI-EVFNLHERYYDIAVLCTFMSLFLQVNMYSSVFFLTWMSFDRYIALARAMRCSLFRTKHHARLSCG-LIWMASVSA-TLVPFTAVHLQHTDEACFCFADVREVQWLE---------VTLGFIVPFAIIGLCYSLIVRVLVRAHRH------------------RGLRPR-------------------------RQKALRMILAVVLVFFVCWLPENVFISVHLLQRTQPGAAPCKQSFRHAHPLTGHIVNLAAFSNSCLNPLIYSFLGETFRDKLRLYIEQKTNLPALNRFCHAALKAVIPDSTEQSDVRFSSAV |
| 4XNV Chain:A ((38-382)) | -----------------------------------------------------SFKCALTKTGFQFYYLPAVY-ILVFIIGFLGNSVAIWMFVFHMKPWSGISVYMFNLALADFLYVLTLPALIFYYFNKTDWIFGDA-MCKLQRFIFHVNLYGSILFLTCISAHRYSGVVYP-K-SLGRLKKKNAICISVLVWLIVVVAISPILFYSGTGVRKNKTITCY-DTTSDEYLRSYFIYSMCTTVAMFCVPLVLILGCYGLIVRALIYKMKKYTCTVCGYIYNPEDGDPDNGVNPGTDFKDIVCPLCGVGKDQFEEVEEPLRRKSIYLVIIVLTVFAVSYIPFHVMKTMNLRARLD-FQTPAMCAFNDRVYATYQVTRGLASLNSCVNPILYFLAGDTFRRR----------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XNV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -241088 for 1988 contacts (-121.3/contact) +
2D Compatibility (PS) -27936 + (NN) -7609 + (LL) 5932
1D Compatibility (HY) -28400 + (ID) 4100
Total energy: -303201.0 ( -152.52 by residue)
QMean score : 0.219
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