Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNESRWTEWRILNMSSGIVNVSERHSCPLGFGHYSVVDVCIFETVVIVLLTFLIIAGNLTVIFVFHCAPLLHHYTTSYFIQTMAYADLFVGVSCLVPTLSLLHYSTGVHESLTCQVFGYIISVLKSVSMACLACISVDRYLAITKPLSYNQLVTPCRLRICIILIWIYSCLI-FLPSFFGWGK------------PGYHGDIFEWCATSWLTSAYFTGFIVCLLYAPAAFVVCFTYFHIFKICRQHTKEINDRRARFPSHEVDSSRETGHSPDRRYAMVLFRITSVFYMLWLPYIIYFLLESSRVLDN---PTLSFLT-TWLAISNSFCNCVIYSLSNSVFRLGLRRLSETMCTSCMCVKDQEAQEPKPRKRANSCSI |
| 2YCW Chain:A ((15-296)) | -------------------------------------------SLLMALVVLLIVAGNVLVIAAIGSTQRLQTLT-NLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDPQALKCYQDPG--------CCDFVTNRAYAIASSIISFYIP-LLIMIFVALRVYREAKEQIRKIDRASKR---KRVMLMRE--HKALKTLGIIM----GVFTLCWLP---FFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYCRSPD-FRKAFKRLLAF--------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YCW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -266749 for 2005 contacts (-133.0/contact) +
2D Compatibility (PS) -26474 + (NN) -2085 + (LL) 6132
1D Compatibility (HY) -31200 + (ID) 4050
Total energy: -324426.0 ( -161.81 by residue)
QMean score : 0.271
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