Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGPGEALLAGLLVMVLAVALLSNALVLLCCAYSAELRTRASGVLLVNLSLGHLLLAALDMPFTLLGVMRGRTPSAPGACQVIGFLDTFLASNAALSVAALSADQWLAVGFPLRYAGRLRPRYAGLLLGCAWGQSLAFSGAALGCSW---LGYSSAF-ASCSLRLPPEPERPRFAAFTATLHAVGFVLPLAVLCLTSLQVHRVARRHCQRMDTVTMKALALLADLHPSVRQRCLIQQKR----RRHRATRKIGIAIATFLICFAPY-VMTRLAELVPFVTVNAQWGILSKCLTYSKAVADPFTYSLLRRPFRQVLAGMVHRLLKRTPRPASTHDSSLDVAGMVHQLLKRTPRPASTHNGSVDTENDSCLQQTH |
| 4MQS Chain:A ((44-326)) | -----VLVAGSLSLV---TIIGNILVMVSIKVNRHLQT-VNNYFLFSLACADLIIGVFSMNLYTLYTVIGYWPLGPVVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPVKRTTKMAGMMIAAAWVLSFILWAPAI-LFWQFIVGVRTVEDGECYIQFFSN------AAVTFGTAIAAFYLPVIIMTVLYWHISRASKS---------------------------------PPPSREKKVTRTILAILLAFIITWAPYNVMVLINTFCAPCIPNTVWTI-GYWLCYINSTINPACYALCNATFKKTFKHLLM----------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MQS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -176530 for 1901 contacts (-92.9/contact) +
2D Compatibility (PS) -26358 + (NN) -15638 + (LL) 6524
1D Compatibility (HY) -27600 + (ID) 3150
Total energy: -242752.0 ( -127.70 by residue)
QMean score : 0.254
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