Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNPFHASCWNTSAELLNKSWNKEFAYQTASVVDTVILPSMIGIICSTGLVGNILIVFTIIRSRK-KTVPDIYICNLAVADLVHIVGMPFLIHQWARGGEWVFGGPLCTIITSLDTCNQFACSAIMTVMSVDRYFALVQPFRLTRWRTRYKTIRINLGLWAASFILALPVWVYSKVIKFKDGVE--SCAFDLTSPDDVLWYTLYLTITTFFFPLPLILVCYILILCYTWEMYQQNKDARCCNPSVPKQRVMKLTKMVLVLVVVFILSAAPYHVIQLVNLQMEQ--PTLAFYVGYYLSICLSYASSSINPFLYILLSGNFQKRLPQIQRRATEKEINNMGNTLKSHF |
| 4MQS Chain:A ((48-331)) | -----------------------------------------GSLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNLYTLYTVIGYWPLGPVVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPVKRTTKMAGMMIAAAWVLSFILWAPAILFWQFIVGVRTVEDGECYIQFFSNAAV---TFGTAIAAFYLPVIIMTVLYWHISRASKS--------------PPPSREKKVTRTILAILLAFIITWAPYNVMVLINTFCAPCIPNTVWTIGYW----LCYINSTINPACYALCNATFKKTFKHLLM------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MQS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -231155 for 1943 contacts (-119.0/contact) +
2D Compatibility (PS) -25733 + (NN) 58 + (LL) 5508
1D Compatibility (HY) -23200 + (ID) 3800
Total energy: -278322.0 ( -143.24 by residue)
QMean score : 0.285
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