Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDNVLPVDSDLSPNISTNTSEPNQFVQPAWQIVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPL--QPRLSATATKVVICVIWVLALLLAF-PQGYYSTTETMPSRVVCMIEWPEHPNKIYEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWASEIPGDSSDRYHEQVSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYINPDLYLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCCPFISAGDYEGLEMKSTRYLQTQGSVYKVSRLETTISTVVGAHEEEPEDGPKATPSSLDLTSNCSSRSDSKTMTESFSFSSNVLS
4GBR Chain:A ((13-282))---------------------------------------SLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILTKTWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAINCYAE-ETCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRV---FQEAKRQLQKIDKFCLK---EHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRK----EVYILLNWIGYVNSGFNPLIYCRSPD-FRIAFQELLCL-------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4GBR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -260961 for 2024 contacts (-128.9/contact) +
2D Compatibility (PS) -26845 + (NN) -4278 + (LL) 7548
1D Compatibility (HY) -26800 + (ID) 3900
Total energy: -315236.0 ( -155.75 by residue)
QMean score : 0.286

(partial model without unconserved sides chains):
PDB file : Tito_4GBR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4GBR-query.scw
PDB file : Tito_Scwrl_4GBR.pdb: