Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNTSHLLALLLPKSPQGENRSKPLGTPYNFSEHCQDSVDVMVFIVTSYSIETVVGVLGNLCLMCVTVRQKEKANVTNLLIANLAFSDFLMCLLCQPLTAVYTIMDYWIFGETLCKMSAFIQCMSVTVSILSLVLVALERHQLIINPTGWKPSISQAYLGIVL--IWVIACVLS-LPFLANSILENVFHKNHSKALEFLADKVVCTESWPLAHHRTIYTTFLLLFQYCLPLGFILVCYARIYRRLQRQGRVFHKGTYSLRAGHM-----KQVNVVLVVMVVAFAVLWLPLHVFNSLEDWHHEAIPICHGNLIFLVCHLLAMASTCVNPFIYGFLNTNFKKEIKALVLTCQQSAPLEESEHLPLSTVHTEVSKGSLRLSGRSNPI |
| 2Y02 Chain:A ((26-299)) | -------------------------------------------------------VAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLP-----IMMHWWRDEDPQALKCYQDPGCCD----FVTNRA-YAIASSIISFYIPLLIMIFVALRVYREAKEQ------------SRVMLMREHKALKTLGIIMGV-FTLCWLPFFLVNIVNVFNRDLVP----DWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLA------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y02.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -274636 for 1873 contacts (-146.6/contact) +
2D Compatibility (PS) -25701 + (NN) -8348 + (LL) 6484
1D Compatibility (HY) -30800 + (ID) 3350
Total energy: -336351.0 ( -179.58 by residue)
QMean score : 0.266
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