Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRLNSSAPGTPGTPAADPFQRAQAGLEEALLAPGFGNASGNASERVLAAPSSELDVNTDIYSKVLVTAVYLALFVVGTVGNTVTAFTLARKKSLQSLQSTVHYHLGSLALSDLLTLLLAMPVELYNFIWVHHPWAFGDAGCRGYYFLRDACTYATALNVASLSVERYLAICHPFKAKTLMSRSRTKKFISAIWLASALLAVPMLFTMGEQNRSADGQHAGGLVC-----TPTIHTATVKVVIQVNTFM-SFIFPMVVISVLNTIIANKLTVMVRQAAEQGQVCTVGGEHSTFSMAIEPGRVQALRHGVRVLRAVVIAFVVCWLPYHVRRLMFCYISDEQWTPFLYDFYHYFYMVTNALFYVSSTINPILYNLVSANFRHIFLATLACLCPVWRRRRKRPAFSRKADSVSSNHTLSSNATRETLY |
| 4RWD Chain:A ((123-402)) | ---------------------------------------------------------------IAITALYSAVCAVGLLGNVLVMFGIVR---YTKMKTATNIYIFNLALADALATS-TLPFQSAKYL--METWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLINICIWVLASGVGVPIMVMAVTRPRD------GAVVCMLQFPSPSWYWDTVT---KICVFLFAFVVPILIITVC-----------------YGLMLLRLRSVRLLSGSKEKDR--SLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVDIDRRDPLVVAALH----LCIALGYANSSLNPVLYAFLDENFKRCFRQLC--------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RWD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -201121 for 2091 contacts (-96.2/contact) +
2D Compatibility (PS) -27445 + (NN) -3021 + (LL) 9096
1D Compatibility (HY) -30000 + (ID) 3850
Total energy: -256341.0 ( -122.59 by residue)
QMean score : 0.314
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