Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEIVSTGNETITEFVLLGFYDIPELHFLFFIVFTAVYVFIIIGNMLIIVAVVSSQRLHKPMYIFLANLSFLDILYTSAVMP---KMLEGFLQEATISVAGCL-LQFFIFGSLATAECLLLAVMAYDRYLAICYPLHYPLLMGPRRYMGLVVTTWLSGFVVDGLVVALVAQLRFCGPNHIDQFYCDFMLFVGLACSDPRVAQVTTLILSVF--CLTIPFGLILTSYARIVVAVLR-------VPAGASRRRAFSTCSSH----LAVVTTFYGTLMI--------FYVAPSAVHSQLLSKVFSLLYTVVTPLFNPVIYTMRNKEVHQALRKIL---CIKQTETLD |
2YDO Chain:A ((15-312)) | ----------------------------------AIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSAAAADILVGVLAIPFAIAISTGFCA----ACHGCLFIACFVLVLTASSIFSLLAI-AIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAI-GLTPML--GWNNCGQPKEGKAHSQGCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLKQMES----------TLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLRQQEPFK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YDO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -271992 for 1938 contacts (-140.3/contact) +
2D Compatibility (PS) -25954 + (NN) -5815 + (LL) 4744
1D Compatibility (HY) -26400 + (ID) 3700
Total energy: -329117.0 ( -169.82 by residue)
QMean score : 0.304
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