Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDKINQTFVREFILLGLSGYPKLEIIFFALILVMYVVILIGNGVLIIASILDS-RLHMPMYFFLGNLSFLDICYTTSSIP--STLVSLISKKRNISFSG---CAVQMFFGFAMGSTECFLLGMMAFDRYVAICNPLRYPIIMNKVVYVLLTSVSWLSGGINSTVQTSLAMRWPFCGNNIINHFLCEILAVLKL----ACSDISVNIVTLAVSNIAFLVLPLLVIFF----SYMFILYTILRTNSATGR--------HKAFSTCSAHLTVVIIFYGTIFFMYAKPKSQDLLGKDNLQATEGLVSMFYGVVTPMLNPIIYSLRNKDVKAAIKYLLSRKAINQ |
2YCX Chain:A ((15-294)) | ----------------------------SLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVV-----RGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFL--PIMMHW----------WRDEDPQALKCYQDPGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIRKIDRASKRKRVMLMREHKALKTLGIIMGVFTLCWLPFFLV----NIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFK---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YCX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -192034 for 1859 contacts (-103.3/contact) +
2D Compatibility (PS) -25675 + (NN) -2227 + (LL) 4524
1D Compatibility (HY) -21600 + (ID) 3350
Total energy: -240362.0 ( -129.30 by residue)
QMean score : 0.246
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