Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGHQNHTFSSDFILLGLFSSSPTSVVFFLVLFVIFIMSVTENTLMILLIRSDSRLHTPMYFLLSHLSLMDILHVSNIVPKMVTNFLSGSRTISFAGCGFQVFLSLTLLGGECLL--LAAMSCDRYVAICHPLRYPILMKEYASALMAGGSWLIGVFNSTVHTAYALQFPFCGSRAIDHFFCEVPAMLKLSCA-------DTTRYERGVCVSAVIFLLIPFSLISASYGQIILTV----LQMKSSEARKKSFSTCSFHMIVVTM--------YYGPFIFTYMRPKSYHTPGQDKFLAI--FYTILTPTLNPFIYSFRNKDVLAVMKNMLKSNFLHKKMNRKIPECVFCLFLC |
| 3C9L Chain:A ((44-312)) | ------------------------------MFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFA--TLGGEIALWSLVVLAIERYVVVCKPMSN-FRFGENHAIMGVAFTWVMAL--------------ACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGP---IFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNDDE--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C9L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -195772 for 1841 contacts (-106.3/contact) +
2D Compatibility (PS) -24585 + (NN) -1980 + (LL) 4436
1D Compatibility (HY) -24000 + (ID) 3050
Total energy: -244951.0 ( -133.05 by residue)
QMean score : 0.239
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