Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKNKTVLTEFILLGLTDVPELQVAVFTFLFLAYLLSILGNLTILILTLLDSHLQTPMYFFLRNFSFLEISFTNIFIPRVLISITTGNKSISFAGCFTQYFFAMFLGATEFYLLAAMSYDRYVAICKPLHYTTIMSSRICIQLIFCSWLGGLMAIIPTITLMSQ---QDFCASNRLNHYFCDYEPLLELSCSDTSLIEKVVFLVASVTLVVTLVLVILSYAFIIKTILKLPSAQQRT----KAFSTCSSHMIVISLSYGSCMFMYINPS----AKEGDTFNK---GVALLITSVAPLLNPFIYTLRNQQVKQPFKDMVKKLLNL |
3DQB Chain:A ((43-315)) | ---------------------------YMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAF-TWVMALACAAPPLVGWSRYIPEGMQCSCGIDYY----------TPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DQB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -205060 for 2023 contacts (-101.4/contact) +
2D Compatibility (PS) -26315 + (NN) -6000 + (LL) 3380
1D Compatibility (HY) -23600 + (ID) 2700
Total energy: -260295.0 ( -128.67 by residue)
QMean score : 0.315
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