Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRLANQTLGGDFFLLGIFSQISHPGRLCLLIFSIFLMAVSWNITLILLIHIDSSLHTPMYFFINQLSLIDLTYISVTVPKMLVNQLAKDKTISVLGCGTQMYFYLQLGG--------AECCLLAAMAYDRYVAICHPLRYSVLMSHRVCLLLASGCWFVGSVDGFMLTPIAMSFPFCRSHEIQHFFC-EVPAVLKLSCSDTSLYKIFMYLCCVIMLLIPVTV-ISVS---YYYIILTIHKMNSVEGRK----------KAFTTCSSHITVVSLFYGAAIYNYMLPSSYQTPEKDMMSSFFYTIL------TPVLNPIIYSFRNKDVTRALKKMLSVQKPPY |
4BVN Chain:A ((6-300)) | -----------------LSQQWEAG-MSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPF--------GATLVVRGTWLWGSFLCELWTSLDVLCVTASVETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFL--PIMMH--WWRDEDPQALKCYQDPG-----CCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIR------KRKTSRVMLMREHKALKTLGIIMGVFTLCW----LPFFLVNIVNVFNRDLVPKWLFVAFNWLGYANSAMNPIILC-RSPDFRKAFKRLLA------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BVN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -198504 for 1799 contacts (-110.3/contact) +
2D Compatibility (PS) -25712 + (NN) -1220 + (LL) 4124
1D Compatibility (HY) -22000 + (ID) 3650
Total energy: -246962.0 ( -137.28 by residue)
QMean score : 0.095
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