Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEPRKNVTDFVLLGFTQNPKEQKVLFVMFLLFYILTMVGNLLIVVTVTVSETLGSPMYFFLAGLSFIDII-----YSSSISPRLISGLFFGNNSISFQSCMAQLFIEHIFGGSEVFL--LLVMAYDCYVAICKPL--------HYLV-IMRQWVCVVLLVVSWVGGFLHSVFQLSIIYGLP-FCGPNVIDHFFCDMYPLLKLVCTDTHAIGLLVVANGGLACTIVFLLLLISYGVILHSLKNLSQKGR-----QKALSTCSSHMTVVVFFFVPCIFMYARPARTF---------PIDKSVSVFYTVITPMLNPLIYTLRNSEMTSAMKKLWRRDLISSST |
4ZWJ Chain:A ((204-477)) | ---------------------------MFLLIVLGFPINFLTLYVTVQ-HKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLQGFFATL-------GGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPE-----GLQCSCG--------IDYYTLKPEVNNESFVIYMFVV-----HFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIYVIAFLICWVPYASVAFYIFTHQGSCFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNVIFK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ZWJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -251270 for 1781 contacts (-141.1/contact) +
2D Compatibility (PS) -24366 + (NN) -4235 + (LL) 3848
1D Compatibility (HY) -30000 + (ID) 3450
Total energy: -309473.0 ( -173.76 by residue)
QMean score : 0.286
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