Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MWPNITAAPFLLTGFPGLEAAHHWISIPFFAVYVCILLGNGMLLYLIKHDHSLHEPMYYFLTMLAGTDLMVTLTTMP-----TVMGI-LWVNHREISSVGCFLQAYF--IHSLSVVES-GSLLAMAYDCFIAIRNPLRYASILTNTRVIALGVGVF-LRGFVSILPVILRLFSFSYCKSHVITRAFCLHQEIMRLACADITFNRLYPVILISLTIFLDCLIILFSYILILNTV------IGIASGEERA------KALNTCISHISCVLIFYVTVMGLTFIYRFGKN-VPEVVHIIMSYIYFLFPPLMNPVIYSIKTKQIQYGIIRLLSKHRFSS |
| 2YCX Chain:A ((21-294)) | -------------------------------VVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLW---------GSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWW------RDEDPQALKCYQDP---GCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIRKIDRASKRKRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGYA-NSAMNPIIYC-RSPDFRKAFK---------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2YCX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -239426 for 1801 contacts (-132.9/contact) +
2D Compatibility (PS) -24941 + (NN) -967 + (LL) 4708
1D Compatibility (HY) -27600 + (ID) 3350
Total energy: -291576.0 ( -161.90 by residue)
QMean score : 0.199
|
|
|