Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGLNKSASTFQLTGFPGMEKAHHWIFIPLLAAYISILLGNGTLLFLIRNDHNLHEPMYYFLAMLAATDLGVTLTTMP----TVLGVLWLDHREIGHGACFSQAYF-IHTLSVMES-GVLLAMAYDCFITIRSPLRYTSILTNTQVMKIGVRVLTRAGL-SIMPIVVRLHWFPYCRSHVLSHAFCLHQDVIKLACADITFNRLYPVVVLFAMVLLDFLIIFFSYILILKT----VMGIGSGGERA--KALNTC-----VSHICCILVFYVTVVCLTFIHRFGKH-VPHVVHITMSYIHFLFPPFMNPFIYSIKTKQIQSGILRLFSLPHSRA |
| 2VT4 Chain:A ((25-298)) | -----------------------------------IVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWL------WGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIM--MHWW----RDEDPQALKCYQDP---GCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIR---------EHKALKTLGIIMGVFTLCWLPFFLVNIV-----NVFNRDLVPDWLFVAFNWLGYANSA-MNPIIYC-RSPDFRKAFKRLLA------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VT4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -216563 for 1713 contacts (-126.4/contact) +
2D Compatibility (PS) -24091 + (NN) -4939 + (LL) 4672
1D Compatibility (HY) -26400 + (ID) 3400
Total energy: -270721.0 ( -158.04 by residue)
QMean score : 0.186
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