Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTILLNSSLQRATFFLTGFQGLEGLHGWISIPFCFIYLTVILG---NLTILHVICTDATLHGPMYYFLGMLAVTDLGLCLSTLPTVL-----GIFWFDTREIGIPACFTQLFFIHTLSSMESSVLLSMSIDRYVAVCNPLHDSTVLTPACIVKMGLSSVLRSALLILPL----PFLLKRFQYCHSHVLAHAYCLHLEIMKLACSSIIVNHIYGLFVVACTVGVDSLLIFLSYALILRTVLSIASHQERLRALNTCVSHIC--------AVLLFYIPMIGLS---LVHRFGEHLPRVVHLFMSYVYLLVPPLMNPIIYSIKTKQIRQRIIKKFQFIKSLRCFWKD |
| 2G87 Chain:A ((45-316)) | ---------------------------------AYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVF-----GPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQ-CSCGI--DYYTPHEETN---------NESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGP--IFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2G87.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -243232 for 1847 contacts (-131.7/contact) +
2D Compatibility (PS) -23828 + (NN) 10499 + (LL) 4428
1D Compatibility (HY) -1600 + (ID) 950
Total energy: -254683.0 ( -137.89 by residue)
QMean score : 0.130
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