Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIQPMASPSNSSTVPVSEFLLICFPNFQSWQHWLSLPLSLLFLLAMGANTTLLITIQLEASLHQPLYYLLSLLSLLDIVLCLTVIPKVLAIFWYDLRSISFPACFL-QMFIMNSFLPMESC--TFMVMAYDRYVAICHPLRYPSIITNQFVAKASVFIVVRNALLTAPIPILTSLLHYCGENVIENCICANLSVSRLSCDNFTLNRIYQFVAG-WTLLGSDLFLIFLSYTFILRAVLRFKAEGAAV-------------KALSTCGSHFILILFFSTILLVVVLTNVA----RKKVPMDILILLNVLHHLIPPALNPIVYGVRTKEIKQGIQKLLQRGR |
4BVN Chain:A ((8-299)) | ---------------------------QQWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLV---VRGTWLWGSFLCELWTSLDVLCVTASVETLCVIAIDRYLAITSPFRYQSLMTR---ARAKVIICTVWA-ISALVSFLPIMMHWWRDEDPQALKCYQDP----GCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIR------KRKTSRVMLMREHKALKTLG---IIMGVFTLCWLPFFLVNIVNVFNRDLVPKWLFVAFNWLGY-ANSAMNPIIL-CRSPDFRKAFKRLLA--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BVN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -235974 for 1964 contacts (-120.1/contact) +
2D Compatibility (PS) -27188 + (NN) -11110 + (LL) 3560
1D Compatibility (HY) -30800 + (ID) 3650
Total energy: -305162.0 ( -155.38 by residue)
QMean score : 0.251
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