Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDGDNQSENSQFLLLGISESPEQQRILFWMFLSMYLVTVLGNVLIILAISSDSHLHTPMYFFLANLSFTDLFFVTNTIPKMLVNFQSQ---NKAISYAGCLTQLYFLVSL--VTLDNLILAVMAYDRYVATCCPLHYVTAMSPGLCVLLLSLCWGLSVLYGLLLTFLLTRVTFCGPREIHYLFCDMYILLWLACSNTHIIHTALIATGCFIFLTPLGFMTTSYVRIVRT----ILQMPSASKK--------YKTFSTCASHLGVVSLFYGTLAMVYLQPLHTYSMKDSVATVMYAVL---TPMMNPFIYRLRNKDMHGAPGRVLWRPFQRPK |
| 2YCX Chain:A ((23-294)) | -----------------------------------LLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADL-----VVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISA----LVSFLPIMMHWWRDEDPQALKCYQDP----GCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIRKIDRASKRKRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIY-CRSPDFRKAFK----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YCX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -219956 for 1793 contacts (-122.7/contact) +
2D Compatibility (PS) -25025 + (NN) -3614 + (LL) 4856
1D Compatibility (HY) -22800 + (ID) 3400
Total energy: -269939.0 ( -150.55 by residue)
QMean score : 0.233
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