Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEPQNTTQVSMFVLLGFSQTQELQKFLFLLFLLVYVTTIVGNLLIMVTVTFDCRLHTPMYFLLRNLALIDLCYSTVTSPKMLVDFLHETKTISYQGCMAQIFFFHLLGGGTVFFLSVMAYDRYIAISQPLRYVTIMNTQLCVGLVVAAWVGGFVHSIVQLALILPLPFCGPNILDNFYCDVPQVLRLACTDTSLLEFLMISNSGL------------LVIIWFLLLLISYTVILVMLRSHSGKARRKAASTCTTHIIVVSMIFIPC--------IYIYTW---PFTPFLMDKAVSISYTVMTPMLNPMIYTLRNQDMKAAMRRLGKCLVICRE |
| 3CAP Chain:A ((44-317)) | -----------------------------MFLLIMLGFPINFLTLYVTVQHK-KLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMG-VAFTWV---------MALA-----CAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFM--TIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CAP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -253262 for 1879 contacts (-134.8/contact) +
2D Compatibility (PS) -25198 + (NN) -3671 + (LL) 4100
1D Compatibility (HY) -22800 + (ID) 3250
Total energy: -304081.0 ( -161.83 by residue)
QMean score : 0.170
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