Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MENNTEVSEFILLGLTNAPELQVPLFIMFTLIYLITLTGNLGMIILILLDSHLHTPMYFFLSNLSLAGIGYSSAVTPKVLTGLLIEDKAISYS-----ACAAQMF---FCAVFATVENYLLSSMAYDRYAAVCNPLHYTTTMT-TRVCACLAIGCYVIGFLNASIQIGDTFRLSFCMSNVIHHFFCDKP---AVITLTCSEKHISELILVLISS-----FNVFFALLVTLISYLFILITIL---KRHTGKGYQKPLS-------------TCGSHLIAIFLFYITVIIMYI-------RPSSSHSMDTDKIASVFYTMIIPMLSPIVYTLRNKDVKNAFMKVVEKAKYSLDSVF |
4UHR Chain:A ((16-304)) | -------------------------------IAVLAILGNVLVCWAVWLNSNLQNVTNYFVV----------SAAAADILVGVLAIPFAIAISTGFCAACHGCLFIACFVLVLTASSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAI-CWVLSF-----AIGLTPMLGW--NN------CGQPKEGKA---GCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLKQMESQPLPGERARSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDC-HAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLRQQEPF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UHR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -230076 for 1829 contacts (-125.8/contact) +
2D Compatibility (PS) -24567 + (NN) -1330 + (LL) 4748
1D Compatibility (HY) -26000 + (ID) 3500
Total energy: -280725.0 ( -153.49 by residue)
QMean score : 0.329
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