Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLGSKPRVHLYILPCASQQVSTMGDRGTSNHSEMTDFILAGFRVRPELHILLFLLFLFVYAMILLGNVGMMTIIMTDPRLNTPMYFFLGNLSFIDLFYSSVIEPKAMINFWSENKSISF-AGCVAQLFLFALLIV---TEGFLLAAMAYDRFIAICNPLLYSVQMSTRLCTQLVAGSYFCGCISSVIQTSMTFTLSFCASRAVDHFYCDSRPLQRLSC--SDLF-IHRMISFSLSCIIILPTIIVIIVSYMYIVSTVLKIHSTEGH----KKAFSTCSS--HLGVVSVLYGAVF------------FMYLTPD--RFPELSKVASLCYSLVTPMLNPLIYSLRNKDVQEALKKFLEKKNIIL |
| 3RFM Chain:A ((14-304)) | --------------------------------------------------------LAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADILVGVLAIPFAI------TISTGFCAACHGCLFIACFVLVLAQSSIFSLLAIAIDRYIAIAIPLRYNGLVTGTRAAGIIA---ICWVLSFAIGLTPMLGWNNCGQP--------GCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFAAARRQLKQMESQPLPGERARSTLQKEVHAAKSAAIIAGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLAHTNSVVNPFIYAYRIREFRQTFRKIIRS----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3RFM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -206325 for 1846 contacts (-111.8/contact) +
2D Compatibility (PS) -25820 + (NN) -4611 + (LL) 5424
1D Compatibility (HY) -22800 + (ID) 2850
Total energy: -256982.0 ( -139.21 by residue)
QMean score : 0.357
|
|
|