Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | METTMGFMDDNATNTSTSFLSVLNPHGAHATSFPFNFSYSDYDMPLDEDEDVTNSRTFFAAKIVIGMALVGIMLVCGIGNFIFIAALVRYKKLRNLTNLLIANLAISDFLVAIVCCPFEMDYYVVRQLSWEHGHVLCTSVNYLRTVSLYVSTNALLAIAIDRYLAIVHPLRPR--MKCQTATGLIALVWTVSILIA---IPSAYFTTETVLVIVKSQEKIFCGQIWPVDQQLYYKSYFLFIFGIEFVGPVVTMTLCYARISRELWFKAVPGFQTEQIRKRLRCRRKTVLVLM-----------CILTAYVLCWAPFYGFTIV----RDFFPTVFVKEKHYLTAFYIVECIAMSNSMINTLCFVTVKNDTVKYFKKIMLLHWKASYNGGKSSADLDLKTIGMPATEEVDCIRLK |
| 3ZPQ Chain:A ((10-300)) | ----------------------------------------------------------WEAGMSLLMALVVLLIVAG--NVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGAT-LVVRG-TWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDPQALKCYQDPGCCDFV-------TNRAYAIASSIISFYIPLLIMIFVALRVYRE---------AKEQ-----------SRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWL---------FVAFNWLGYANSAMNPIIYCR-SPDFRKAFKRLLA----------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZPQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -247046 for 1903 contacts (-129.8/contact) +
2D Compatibility (PS) -25579 + (NN) 544 + (LL) 7860
1D Compatibility (HY) -30400 + (ID) 4250
Total energy: -298871.0 ( -157.05 by residue)
QMean score : 0.276
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