Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVSCGQVSSALSPCISYARGNGANPSAACCSGVRSLASSARSTADKQVACKCI--KSA--AAGLNAGKAAGIPTKCGVSVPYAISSSVDCSKIR
1L6H Chain:A ((6-66))
--------GQLTVCTGAIAGGA-RPTAACCSSLRA-----------QQGCFCQFAKDPRYGRYVNSPNARKAVSSCGIALP-------------
General information:
TITO was launched using:
RESULT:
Template:
1L6H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20420 for 369 contacts (-55.3/contact) +
2D Compatibility (PS) -5990 + (NN) -1732 + (LL) 2152
1D Compatibility (HY) -2400 + (ID) 950
Total energy: -29340.0 ( -79.51 by residue)
QMean score : 0.222
(partial model without unconserved sides chains):
PDB file :
Tito_1L6H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L6H-query.scw
PDB file :
Tito_Scwrl_1L6H.pdb
: