Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AEAEAAAEVSCGDAVSALIPCGSFLVGAVAGAPSESCCRGAQGLRRMAGTPGARRALCRCLEQSGPSFGVL---------------PDRARQL---PALCKLGISIPVSPHTD----CDKIQ-------
1B0A Chain:A ((2-122))
AAKIIDGKTIAQQVRSEVAQKVQARIAAGLRAP------GLAVV--LVGSNPASQIYVASKRKACEEVGFVSRSYDLPETTSEAELLELIDTLNADNTIDGILVQLPLPAGIDNVKVLERIHPDKDVDG
General information:
TITO was launched using:
RESULT:
Template:
1B0A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18337 for 483 contacts (-38.0/contact) +
2D Compatibility (PS) -9032 + (NN) 342 + (LL) 460
1D Compatibility (HY) -2400 + (ID) 650
Total energy: -29617.0 ( -61.32 by residue)
QMean score : 0.280
(partial model without unconserved sides chains):
PDB file :
Tito_1B0A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B0A-query.scw
PDB file :
Tito_Scwrl_1B0A.pdb
: