Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ATACDATQLTPCAGAIIGSSPPTAACCSRLKEQ--Q-PCLCTYARDPNLQRY---VN-------SPNGKKAMAACKVPVP-SC
3OB4 Chain:A ((427-488))
---------------------HQERCCNELNEFENNQRCMCEALQQIMENQSDRLQGRQQEQQFKRELRNLPQQCGLRAPQRC
General information:
TITO was launched using:
RESULT:
Template:
3OB4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11652 for 249 contacts (-46.8/contact) +
2D Compatibility (PS) -4597 + (NN) 2861 + (LL) 936
1D Compatibility (HY) -1200 + (ID) 450
Total energy: -14102.0 ( -56.63 by residue)
QMean score : 0.369
(partial model without unconserved sides chains):
PDB file :
Tito_3OB4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OB4-query.scw
PDB file :
Tito_Scwrl_3OB4.pdb
: