Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QDCDAGKLIVCAAAIIGGAEPSASCCTNLKA-----------QRGCLCKYASNPAYSGY--INSPTTRKTLASCGIPIPTCPQ
2ALG Chain:A ((9-79))
-----SSLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNC--LKQLS-ASVPGVNPNNAAALPGKCGVSIP----
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22059 for 342 contacts (-64.5/contact) +
2D Compatibility (PS) -5736 + (NN) 570 + (LL) 504
1D Compatibility (HY) -3200 + (ID) 700
Total energy: -30621.0 ( -89.54 by residue)
QMean score : 0.267
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: