Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
RASKKASCDLM--QLSPCVSAFSGVGQGSPSSACCSKLKA-----------QGSSCLCLYKDDPKVKRI--VSSNRTKRVFTACKVPAPNC
2ALG Chain:A ((2-79))
-----ITCGQVSSSLAPCIPYVRG--GGAVPPACCNGIRNVNNLARTTPDRQ-AACNC--LKQLS-ASVPGVNPNNAAALPGKCGVSIP--
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17875 for 382 contacts (-46.8/contact) +
2D Compatibility (PS) -6435 + (NN) -2514 + (LL) 628
1D Compatibility (HY) -5200 + (ID) 850
Total energy: -32246.0 ( -84.41 by residue)
QMean score : 0.231
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: