Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGCNPSALSPCMSAIMLGAAPSPGCCVQLRAQQPCLCQYARDPSYRSYVTSPS----AQRAVKACNVKANC
1TBA Chain:A ((11-77))
EGSIGNGLD--LTGILFGNIDSEGRLLQDDDGEGRGGT-GFDAELRENIGSLSKLGLDSMLLEVIDLKEA-
General information:
TITO was launched using:
RESULT:
Template:
1TBA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17122 for 346 contacts (-49.5/contact) +
2D Compatibility (PS) -6348 + (NN) -1223 + (LL) 64
1D Compatibility (HY) -2000 + (ID) 600
Total energy: -27229.0 ( -78.70 by residue)
QMean score : 0.296
(partial model without unconserved sides chains):
PDB file :
Tito_1TBA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TBA-query.scw
PDB file :
Tito_Scwrl_1TBA.pdb
: