Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VCNMSNDEFMKCQPAAAATSNPTTNPSAGCCSALSHADL----------NCLCSYKNSPWLSIYNIDPNRAMQLPAKCGLTMPANC
1BWO Chain:A ((3-79))
-CGHVDSLVRPCLSYVQGG-P---GPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGI--HNLNEDNARSIPPKCGVNLPY--
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9946 for 430 contacts (-23.1/contact) +
2D Compatibility (PS) -6619 + (NN) -1271 + (LL) 280
1D Compatibility (HY) -2400 + (ID) 750
Total energy: -20706.0 ( -48.15 by residue)
QMean score : 0.208
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: