Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ICNLSDAGLQACKPAAAVRNPADTPSSECCDALAAADL----------PCLCRYKGSAGARVWVRFY-GIDLNRAMTLPGKCGLTLPAHC
1T12 Chain:A ((4-78))
-CGQVTSNLAPCLAYLRNTG----PLGRCCGGVKALVNSARTTEDRQIACTC-LKSAA------GAISGINLGKAAGLPSTCGVNIP---
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24723 for 429 contacts (-57.6/contact) +
2D Compatibility (PS) -6878 + (NN) -3430 + (LL) 1140
1D Compatibility (HY) -4000 + (ID) 1000
Total energy: -38891.0 ( -90.66 by residue)
QMean score : 0.229
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: