Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
IDLCGMTQAELNECLPAVSKNNPTSPSLLCCNALKH--------ADYT--CLCGYKNSPWLGSF-GVDPKLASSLPKECDLTNAPTC
1SIY Chain:A ((2-78))
--TCGQVQGNLAQCIGFLQKG--GVVPPSCCTGVKNILNSSRTTADRRAVCSCL-KAA--AGAVRGINPNNAEALPGKCGVNIP---
General information:
TITO was launched using:
RESULT:
Template:
1SIY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19803 for 431 contacts (-45.9/contact) +
2D Compatibility (PS) -6731 + (NN) -3889 + (LL) -16
1D Compatibility (HY) -2800 + (ID) 1050
Total energy: -34289.0 ( -79.56 by residue)
QMean score : 0.363
(partial model without unconserved sides chains):
PDB file :
Tito_1SIY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SIY-query.scw
PDB file :
Tito_Scwrl_1SIY.pdb
: