Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
IPVCNIDTNDLAKCRPAVTGNNPPPPGPDCCAVARVANL----------QCLCPYKPYLPTVGIDPSRVRPLLANCGVNSPSCF
1BWO Chain:A ((2-78))
--DCGHVDSLVRPCLSYVQGG--PGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNLP---
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11633 for 433 contacts (-26.9/contact) +
2D Compatibility (PS) -6915 + (NN) -2974 + (LL) 4
1D Compatibility (HY) 0 + (ID) 800
Total energy: -22318.0 ( -51.54 by residue)
QMean score : 0.236
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: