Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
KDECGATPPDQEALKLVPCVAAGKDPDSKPSDRCCAAVKEIGER-------SPACLCAVLLSKIVRRV-GVKPEVAITIPKRCDLTDRPIGYKCGDYTMPSLQLKD
1SIY Chain:A ((2-78))
-------TCGQVQGNLAQCIGFLQKG-GVVPPSCCTGVKNILNSSRTTADRRAVCSC-L-KA-AAGAVRGINPNNAEALPGKCGVNIP------------------
General information:
TITO was launched using:
RESULT:
Template:
1SIY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24179 for 493 contacts (-49.0/contact) +
2D Compatibility (PS) -7314 + (NN) -5363 + (LL) 980
1D Compatibility (HY) -2800 + (ID) 800
Total energy: -39476.0 ( -80.07 by residue)
QMean score : 0.208
(partial model without unconserved sides chains):
PDB file :
Tito_1SIY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SIY-query.scw
PDB file :
Tito_Scwrl_1SIY.pdb
: