Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QTECVSKIVPCFRFLNTTTKPSTDCCNSIKEAME-------KDFSCLCTIYNTPGLLAQF-NITTDQALGLNLRCGVNTDLSACSGTLILQDLRPLQL
2ALG Chain:A ((9-79))
-----SSLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNC--LKQL--SASVPGVNPNNAAALPGKCGVSIP------------------
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27275 for 385 contacts (-70.8/contact) +
2D Compatibility (PS) -6473 + (NN) -91 + (LL) 2192
1D Compatibility (HY) -3600 + (ID) 750
Total energy: -35997.0 ( -93.50 by residue)
QMean score : 0.185
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: