Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
HPCGRTFLSALIQLVPCRPSVAPFSTLPPNGLCCAAIKTLG----------QPCLCVLAKGPPIV-GVDRTLALHLPGKCSANFLPCN
2ALG Chain:A ((3-79))
-----TCGQVSSSLAPCIPYVRGG--GAVPPACCNGIRNVNNLARTTPDRQAACNC-LKQLSASVPGVNPNNAAALPGKCGVSIP---
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39051 for 424 contacts (-92.1/contact) +
2D Compatibility (PS) -6899 + (NN) -5454 + (LL) -60
1D Compatibility (HY) -1600 + (ID) 1050
Total energy: -54114.0 ( -127.63 by residue)
QMean score : 0.039
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: