Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------AISCGTVAS--KLAPCIPYVTNRGPLGGC---CGGVKSLYGLAR-----------TTPDRQSVCGCLKSLASSY------NVNLGKAAGLPGQCGVNIPYKISPSTDCSKVH-------- |
1QPO Chain:A ((1-284)) | GLSDWELAAARAAIARGLDEDLRYGPDVTTLATVPASATTTASLVTREAGVVAGLDVALLTLNEVLGTNGYRVLDRVEDGARVPPGEALMTLEAQTRGLLTAERTMLNLVGHLSGIATATAAWVDAVRGTKAKIRDTRKTLPGLRALQKYAVRTGGGVNHRLGLGDAALIKDNHVAAAGSVVDALRAVRNAAPDLPCEVEVDSLEQLDAVLPEKPELILLDNFAVWQTQTAVQRRDSRAPTVMLESSGGLSLQTAATY-AETGVDY---LAVGALTHSVRVLDIGLDM |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QPO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -38180 for 453 contacts (-84.3/contact) +
2D Compatibility (PS) -8688 + (NN) 1035 + (LL) -124
1D Compatibility (HY) -3200 + (ID) 850
Total energy: -50007.0 ( -110.39 by residue)
QMean score : 0.365
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