Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------AITCGRVDTALAPCLGYLQG---GPGPS----AQCCGGVRNLNSAAVTTPDRQAACNCLKSAAGSI-------SRLN----ANNAAALPGKCVVNIPYKISTSTNCATIRV----------
1HSS Chain:A ((5-124))
MCYPGQAFQ----VPALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI--------SEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIV----VDASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54013 for 494 contacts (-109.3/contact) +
2D Compatibility (PS) -7909 + (NN) -3777 + (LL) 844
1D Compatibility (HY) -5200 + (ID) 900
Total energy: -70955.0 ( -143.63 by residue)
QMean score : 0.281
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: