Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
SLTCPQIKGNLTPCVLYLKN---GG---VL------------PPSCCKGVRAVNDASRTTSDRQSACNCLKDTAKGIA----GLN-----PNLAAGLPGKCGVNIPYKISPSTNCNNVK
1W2Q Chain:A ((22-114))
-------RVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEME-----N-TQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFRAP-------------
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21725 for 393 contacts (-55.3/contact) +
2D Compatibility (PS) -6542 + (NN) 383 + (LL) 892
1D Compatibility (HY) -1600 + (ID) 650
Total energy: -29242.0 ( -74.41 by residue)
QMean score : 0.242
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: