Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VLTCGQVTGALAPCLGYLRSQVNVPVPLTCCNVVRGLNNAARTTLDKRTACGCLKQTANAVTGLNLNAAAGLPARCGVNIPYKISPTTDCNRVV
1T12 Chain:A ((1-90))
AITCGQVTSNLAPCLAYLRNTG---PLGRCCGGVKALVNSARTTEDRQIACTCLKSAAGAISGINLGKAAGLPSTCGVNIPYKISPSTDCSKV-
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69104 for 679 contacts (-101.8/contact) +
2D Compatibility (PS) -8964 + (NN) -1267 + (LL) 164
1D Compatibility (HY) -8000 + (ID) 2700
Total energy: -89871.0 ( -132.36 by residue)
QMean score : 0.504
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: