Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------VTCGQVVG--AVAPCLGYLRNGGTPPQPC---CTGVRGLRNAAR-----------TTSDRKTICNCLKSASSSY-----RGVSGNYAASLPGKCGVNLPYKISPSTDCNRIQ-------- |
1QPO Chain:A ((1-284)) | GLSDWELAAARAAIARGLDEDLRYGPDVTTLATVPASATTTASLVTREAGVVAGLDVALLTLNEVLGTNGYRVLDRVEDGARVPPGEALMTLEAQTRGLLTAERTMLNLVGHLSGIATATAAWVDAVRGTKAKIRDTRKTLPGLRALQKYAVRTGGGVNHRLGLGDAALIKDNHVAAAGSVVDALRAVRNA-APDLPCEVEVDSLEQLDAVLPEKPELILLDNFAVWQTQTAVQRRDSRAPTVMLESSGGLSLQTAATY-AETGVDY---LAVGALTHSVRVLDIGLDM |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1QPO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -34545 for 455 contacts (-75.9/contact) +
2D Compatibility (PS) -9049 + (NN) -4290 + (LL) -296
1D Compatibility (HY) -2800 + (ID) 850
Total energy: -51830.0 ( -113.91 by residue)
QMean score : 0.467
|
|
|