Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------------------------------------------------------------------------------------------------------------------------------VSCGDAVSALIPCGSFLLGVGAPKPSSECCASAQSLNKLTTTTADRRAVCQCFVKSGPSFGVKPARTKLLPSLC---KLNINIPVTPNVDCNK-------------- |
| 1F1Z Chain:A ((8-267)) | FSEVQIARRIKEGRGQGHGKDYIPWLTVQEVPSSGRSHRIYSHKTGRVHHLLSDLELAVFLSLEWESSVLDIREQFPLLPSDTRQIAIDSGIKHPVIRGVDQVMSTDFLVDCKDGPFEQFAIQVKPAAALQDERTLEKLELERRYWQQKQIPWFIFTDKEINPVVKENIEWLYSVKTEEVSAELLAQLSPLAHILQEKGD-ENIINVCKQVDIAYDLELGKTLSEIRALTANG-FIKFNIYKSFRANKCADLCISQVVNMEE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1F1Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -18680 for 511 contacts (-36.6/contact) +
2D Compatibility (PS) -9006 + (NN) -3384 + (LL) 276
1D Compatibility (HY) -4800 + (ID) 550
Total energy: -36144.0 ( -70.73 by residue)
QMean score : 0.283
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