Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
NGPCSNTLSSLSACMPAIEGENPQSPSVACCDVVRGSD----------ASCLCSIVTTYANLTDAM-GINLRAALLLPKQCKRAVP----SGFTCGEID
2ALG Chain:A ((3-92))
--TCGQVSSSLAPCIPYVRGG--GAVPPACCNGIRNVNNLARTTPDRQAACNC-LKQL----SASVPGVNPNNAAALPGKCGVSIPYKISASTNCATVK
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41800 for 474 contacts (-88.2/contact) +
2D Compatibility (PS) -7524 + (NN) -3010 + (LL) -168
1D Compatibility (HY) -3600 + (ID) 1100
Total energy: -57202.0 ( -120.68 by residue)
QMean score : 0.354
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: