Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
SVDCTTLVLSMADCLSFVSNDSTSKKPEGTCCSGLKTVLG-------TDAECLCEAFKSSAQFGVVLNVTKALALPSACKIKAP-PASNCG
1BWO Chain:A ((2-82))
--DCGHVDSLVRPCLSYVQGG---PGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIA-RGIH-NLNEDNARSIPPKCGVNLPYTIS---
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18989 for 474 contacts (-40.1/contact) +
2D Compatibility (PS) -7345 + (NN) -2756 + (LL) 128
1D Compatibility (HY) -4000 + (ID) 1050
Total energy: -34012.0 ( -71.76 by residue)
QMean score : 0.351
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: