Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSCNTDLTDLVSKCQRFVIKTGPKFSPSPSCCAVVKNVDV----------ACVCDLITKEIEDMIDMDKMVYVARSCGKKIS----AGTKCGNTQANAGGIVSGYIVPTA
1BWO Chain:A ((2-89))
-DCGHVDSLV-RPCLSYVQGG-P--GPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNLPYTISLNIDCSR-----------------
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13436 for 471 contacts (-28.5/contact) +
2D Compatibility (PS) -7389 + (NN) -577 + (LL) 1112
1D Compatibility (HY) -1200 + (ID) 900
Total energy: -22390.0 ( -47.54 by residue)
QMean score : 0.233
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: