Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QCDPEQLVACASPIFYGTAPSESCCSNLRE-----------QQKEGCLCQYAKDPMYASY--VNNTNARKTIAACGIPIPSC
2ALG Chain:A ((9-79))
----SSLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQA--ACNC--LKQLS-ASVPGVNPNNAAALPGKCGVSIP--
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16125 for 342 contacts (-47.1/contact) +
2D Compatibility (PS) -5895 + (NN) -599 + (LL) 460
1D Compatibility (HY) -2800 + (ID) 1050
Total energy: -26009.0 ( -76.05 by residue)
QMean score : 0.275
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: