Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QNCSAAIGELMTCGPYVLPGNNGAPSEQCCSALRAV--NHGCLCETINI---------------------ISSLPDHCSLP-AVNCAA
3OB4 Chain:A ((428-488))
-------------------------QERCCNELNEFENNQRCMCEALQQIMENQSDRLQGRQQEQQFKRELRNLPQQCGLRAPQRC--
General information:
TITO was launched using:
RESULT:
Template:
3OB4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23335 for 197 contacts (-118.5/contact) +
2D Compatibility (PS) -3666 + (NN) 645 + (LL) 780
1D Compatibility (HY) -4400 + (ID) 650
Total energy: -30626.0 ( -155.46 by residue)
QMean score : 0.310
(partial model without unconserved sides chains):
PDB file :
Tito_3OB4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OB4-query.scw
PDB file :
Tito_Scwrl_3OB4.pdb
: