Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QQCTSQLNNLNVCAPFVVPGAANTNPNAECCNALEAVQH----------DCLCSTL----------QISSRLPSQCNLPPLTCGN
1T12 Chain:A ((3-76))
-TCGQVTSNLAPCLAYLRNT--G--PLGRCCGGVKALVNSARTTEDRQIACTCLKSAAGAISGINLGKAAGLPSTCGVN------
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25531 for 330 contacts (-77.4/contact) +
2D Compatibility (PS) -5476 + (NN) -5213 + (LL) 272
1D Compatibility (HY) -3200 + (ID) 700
Total energy: -39848.0 ( -120.75 by residue)
QMean score : 0.405
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: