Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGKTPIRSAAASLSPCLGAAGNARAAVPPACCSKVTALIKTAP-------KCLCAVLLSPLAKQA-GIKPGIAITIPKRCSIKNRQAGKKCGKYTLP
1T12 Chain:A ((2-78))
------ITCGQVTSNLAPCLAYLRNTG--PLGRCCGGVKALVNSARTTEDRQIACTC--LKS-AAGAISGINLGKAAGLPSTCGVNIP------------
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40339 for 478 contacts (-84.4/contact) +
2D Compatibility (PS) -7181 + (NN) -3181 + (LL) 856
1D Compatibility (HY) -4000 + (ID) 1100
Total energy: -54945.0 ( -114.95 by residue)
QMean score : 0.432
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: