Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGATPPDTVALRLAPCASAAEDPGSAPSGSCCSAVHAIGK-------QSPRCLCAVMLSNTARSA-GIKAEVAITIPKRCNLADRPVGYKCGGNQAN
2ALG Chain:A ((2-79))
------ITCGQVSSSLAPCIPYVRGG-GAVPPACCNGIRNVNNLARTTPDRQAACNC--LKQL-SASVPGVNPNNAAALPGKCGVSIP------------
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29221 for 453 contacts (-64.5/contact) +
2D Compatibility (PS) -7251 + (NN) -3810 + (LL) 172
1D Compatibility (HY) -3600 + (ID) 750
Total energy: -44460.0 ( -98.15 by residue)
QMean score : 0.167
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: