Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECPRSTPDMEAMKLIPCASAASDSNAPVSSGCCAQVKTLGHN--------PKCLCAVMLSNTAKSS-GVKPEVAVTIPKRCNLADRPIGYKCGAYTLP
1T12 Chain:A ((3-78))
-------TCGQVTSNLAPCLAYLRNTG--PLGRCCGGVKALVNSARTTEDRQIACTC--LKS-AAGAISGINLGKAAGLPSTCGVNIP------------
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20634 for 455 contacts (-45.3/contact) +
2D Compatibility (PS) -7051 + (NN) -2793 + (LL) 580
1D Compatibility (HY) -2000 + (ID) 850
Total energy: -32748.0 ( -71.97 by residue)
QMean score : 0.247
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: